Book Series Article

·2016

Thermomechanical Properties of Anti-Parallel β-Sheets with Bombyx mori Silk Nanostructures [Gly-Ser-Gly-Ala-Gly-Ala]n and [Gly-Ala]n

Seçkin D. Günay YTU , Ünsal Akdere YTU , Baki Aksakal YTU , Tahir Çağın , Çetin Taşseven YTU

Materials science forum

Abstract

The present study aims to investigate temperature dependence of anisotropic mechanical properties of anti-parallel beta pleated sheets with Bombyx mori silk nanostructures in sequence of [Gly-Ser-Gly-Ala-Gly-Ala] n and commonly used model in sequence of [Gly-Ala] n . Classical molecular dynamics simulation method was used to carry out calculations, preliminary, at 300K. Ionic interactions were modeled by CHARMM force field method. Substitution of Ala with Ser residue results with a gradual conformational change in the stress-strain.

Keywords

Bombyx mori Materials science SILK Nanostructure Molecular dynamics Ionic bonding Crystallography Peptide Anisotropy Residue (chemistry) Polymer chemistry Nanotechnology Composite material Computational chemistry Ion Chemistry Organic chemistry Biochemistry Physics

Subject Areas

Silk-based biomaterials and applications ·Biomaterials ·Physical Sciences
Silkworms and Sericulture Research ·Insect Science ·Life Sciences
Tribology and Wear Analysis ·Mechanics of Materials ·Physical Sciences